species:   Comil
pid:       PID1155
parent:    milR23
paralog:   
locus:     NW_006271974.1:422722-422838
matures:   ['CCUGGGCGAGCCCAUGUUUGA', 'AAAGAUGGGCGGUUCGAAGUGGAC']
srr:       SRR8054058
genome:    /Users/jax/+Genomes/Fungal_genomes/Comil.GCF_000225605.1_CmilitarisCM01_v01_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054058.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054058.cram NW_006271974.1:422722-422838

2 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

***********************                                                                    **************************
GUCCUGGGCGAGCCCAUGUUUGACGCGCCGAUGCCAUACGUUCUCAUCACUGAAGGUUGUGUCAAUGGCACCGAGAAGGCGGGCUACUGGGCGAAAGAUGGGCGGUUCGAAGUGGAC
(((((((((..((((((.(((..(((.(((((((...((.(((........))).)).)))))..((((.(((......)))))))..)))))))).)))))).)))))....))))
--CCUGGGCGAGCCCAUGUUUGA---------------------------------------------------------------------------------------------- l=21 a=0 c
---------------------------------------------------------------------------------------------AAAGAUGGGCGGUUCGAAGUGGAC l=24 a=0 c*
--CCUGGGCGAGCCCAUGUUUGA---------------------------------------------------------------------------------------------- l=21 a=0 ma
---------------------------------------------------------------------------------------------AAAGAUGGGCGGUUCGAAGUGGAC l=24 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-000110001100
fn-001
